Responsive image
博碩士論文 etd-0728109-142101 詳細資訊
Title page for etd-0728109-142101
論文名稱
Title
腸病毒七十一型感染之人類橫紋肌肉瘤早期膜蛋白質體分析
Proteomic Analysis of Membrane Fraction of Rhabdomyosarcoma Cells in Response to Early Enterovirus 71 Infection
系所名稱
Department
畢業學年期
Year, semester
語文別
Language
學位類別
Degree
頁數
Number of pages
59
研究生
Author
指導教授
Advisor
召集委員
Convenor
口試委員
Advisory Committee
口試日期
Date of Exam
2009-07-20
繳交日期
Date of Submission
2009-07-28
關鍵字
Keywords
膜蛋白質體、腸病毒七十一型
EV71, membrane proteomic
統計
Statistics
本論文已被瀏覽 5788 次,被下載 5
The thesis/dissertation has been browsed 5788 times, has been downloaded 5 times.
中文摘要
腸病毒為台灣小兒感染性疾病之中常見病因,一般感染為無症狀或輕微類似
感冒症狀,但因腸病毒感染而轉變重症者卻會有極高致死率,以 Enterovirus 71
最具危險性,會引起手口足病、腦炎及中樞神經疾病並且在1998年在台灣造成大
流行。一般認為小核糖核酸病毒科的病毒,經由與特定細胞上的病毒受體結合,
例如:小兒麻痺病毒與克沙奇病毒分別以細胞表面上人類小兒麻痺病毒接受體
(human poliovirus receptor, PVR; CD155) 和克沙奇病毒及腺病毒受體
(coxsackievirus and adenovirus receptor, CAR) 接合後,改變病毒本身的蛋
白質結構 (protein conformation) 、幫助病毒脫去病毒外殼 (uncoating) ,
且有研究指出內皮細胞受到克沙奇病毒感染後會表現更多 CAR 和 DAF 當作病
毒受器。但到目前為止並未明確了解腸病毒71型的接受器,為了瞭解腸病毒71
型初期感染途徑。我們利用人類橫紋肌肉瘤細胞感染腸病毒71型六小時後,淬取
其膜蛋白並配合二維電泳分析找出差異性蛋白質。在此我們發現有些熱休克蛋白
如 HSP60、70 大量表現,其可幫助細胞渡過病毒感染所造成的壓力而不會死亡。
另外脂質相關蛋白表現量發生改變,這可能指出腸病毒感染會改變膜上脂質的組
成,使細胞更容易接受病毒顆粒。另一方面發現有醣化蛋白表現增加,其也可能
會影響病毒與細胞表面的吸附。這些蛋白質的改變對腸病毒七十一型的初期感染
研究中扮演的角色具有進一步研究的價值。
Abstract
Enterovirus 71 (EV71) infection is one of epidemic disease in children commonly
in Taiwan. The clinical manifestation of EV71 infection may include acute respiratory
disease, hand foot and mouth disease, herpangina, myocarditis, aseptic meningitis,
acute flaccid paralysis, brainstem or cerebellar encephalitis. EV71 infection usually
occurs through the fecal–oral route, leading to viremia and invasion of the skin and
mucosa. Infection is initiated by attachment to putative receptor, which induces
conformational changes in the virus that facilitate translocation of the viral RNA into
the cytoplasm. Some cell surface molecules have been primarily identified for
enterovirus which like poliovirus receptor (CD155), coxsackievirus and adenovirus
receptor, Decay accelerating factor (CD55) belong Echoviruses but no EV71 receptor
has yet been found. Rhabdomyosarcoma cells were used as a model for EV71
infection. We use two-dimensional gel electrophoresis to analyse membrane fraction
from rhabdomyosarcoma cells infected with EV71 at 6 h post infection. Twenty-eight
differentially expressed protein spots were identified. Some lipid-associated protein
slightly change after EV71 infection that may indicate EV71 infection will change
membrane structure of rhabdomyosarcoma cells. And some O-linked glycosylation
proteins were also upregulated after EV71 infection. It is interesting to reveal the role
of these proteins in early EV71 infection and cell response.
目次 Table of Contents
中文摘要 I
英文摘要 II
英文縮寫表 III
壹、序言(Introduction)
1.1 腸病毒流行病學 1
1.2 腸病毒71 型的病毒特性 2
1.3 病毒進入細胞的方式 4
1.4 腸病毒受體 5
貳、實驗流程(Experiment flowchart) 7
參、 材料與方法(Materials and Method)
3.1 RD 細胞繼代培養 8
3.2 RD 細胞解凍 8
3.3 RD 細胞冷凍保存 9
3.4 腸病毒培養與感染 10
3.4.1 病毒大量培養 11
3.4.2 病毒感染 12
3.4.3 病毒價效測定 Viral titration 12
3.5. 膜蛋白萃取與定量 13
3.5.1 細胞膜蛋白萃取 14
3.5.2 TCA/Acetone 沉澱 14
3.6. 二維電泳法 15
3.6.1 Isoelectric focusing electrophoresis 聚電焦電泳 15
3.6.2 Immobiline DryStrip Equilibration 17
3.6.3 聚丙烯酼胺膠體電泳Sodiumdodecylsulfate Polyacrylamide Gel
Electrophoresis (SDS-PAGE)
17
3.6.4 Silver stain 銀離子染色 19
3.6.5 Coomassie brilliant blue R-250 stain 20
3.6.6 Gel imaging analysis 膠體影像分析及統計分析 20
3.6.7 In gel digestion 21
3.6.8 MALDI-TOF 質譜操作 22
3.7 免疫沉澱
23
肆、 實驗結果(Result)
4.1 膜蛋白萃取技術建立與分析 24
4.2 腸病毒感染差異 25
4.3 二維電泳膠片之分析結果 25
4.4 軟體比對分析及統計 26
4.5 差異性蛋白質身分鑑定 26
4.6 腸病毒外殼蛋白VP1 免疫沉澱結果 28
伍、 實驗討論(Discussion)
5.1 腸病毒七十一型與RD 細胞株 29
5.2 腸病毒七十一型的細胞毒性 30
5.3 膜蛋白質體學與疾病治療的討論 31
5.4 差異性蛋白質與討論 33
陸、 結論(Conclusion) 37
柒、 參考文獻(Reference) 38
捌、 圖表(Figures and Tables Countents)
Figure 1-A. 萃取RD 細胞膜蛋白為細胞膜層與細胞質層之西方點墨分析 43
Figure 1-B. EV71 感染前後RD 細胞膜蛋白初步差異性電泳分析 44
Figure 1-C. EV71 感染前後膜蛋白電泳膠量化分析 45
Figure 2. 二維電泳分析EV71 感染前後之RD 細胞膜蛋白差異 46
Figure 3. RD 細胞株感染EV71 二維電泳膠圖之表現量上升蛋白點 47
Figure 4. 二維電泳鑑定蛋白質點3D 分析 48
Figure 5. Anti-EV71 VP1 antibody 免疫沉澱分析感染EV71 後之RD 細胞 49
Table 1. RD 細胞株感染腸病毒七十一型後表現改變之蛋白質身分鑑定一覽表 50
參考文獻 References
Bauer, S., Gottesman, G., Sirota, L., Litmanovitz, I., Ashkenazi, S., and Levi, I. (2002).
Severe Coxsackie virus B infection in preterm newborns treated with pleconaril. Eur J
Pediatr 161, 491-493.
Bernhard, E.J., McKenna, W.G., Hamilton, A.D., Sebti, S.M., Qian, Y., Wu, J.M., and
Muschel, R.J. (1998). Inhibiting Ras prenylation increases the radiosensitivity of human
tumor cell lines with activating mutations of ras oncogenes. Cancer Res 58, 1754-1761.
Blomberg, J., Lycke, E., Ahlfors, K., Johnsson, T., Wolontis, S., and von Zeipel, G.
(1974). Letter: New enterovirus type associated with epidemic of aseptic meningitis
and-or hand, foot, and mouth disease. Lancet 2, 112.
Brenner, B.G., and Wainberg, Z. (2001). Heat shock proteins: novel therapeutic tools for
HIV-infection? Expert Opin Biol Ther 1, 67-77.
Brown, D., and Waneck, G.L. (1992). Glycosyl-phosphatidylinositol-anchored membrane
proteins. J Am Soc Nephrol 3, 895-906.
Carthy, C.M., Granville, D.J., Watson, K.A., Anderson, D.R., Wilson, J.E., Yang, D.,
Hunt, D.W., and McManus, B.M. (1998). Caspase activation and specific cleavage of
substrates after coxsackievirus B3-induced cytopathic effect in HeLa cells. J Virol 72,
7669-7675.
Chan, L.G., Parashar, U.D., Lye, M.S., Ong, F.G., Zaki, S.R., Alexander, J.P., Ho, K.K.,
Han, L.L., Pallansch, M.A., Suleiman, A.B., et al. (2000). Deaths of children during an
outbreak of hand, foot, and mouth disease in sarawak, malaysia: clinical and pathological
characteristics of the disease. For the Outbreak Study Group. Clin Infect Dis 31, 678-683.
Chen, H.F., Chang, M.H., Chiang, B.L., and Jeng, S.T. (2006). Oral immunization of
mice using transgenic tomato fruit expressing VP1 protein from enterovirus 71. Vaccine
24, 2944-2951.
Chen, H.L., Huang, J.Y., Chu, T.W., Tsai, T.C., Hung, C.M., Lin, C.C., Liu, F.C., Wang,
L.C., Chen, Y.J., Lin, M.F., et al. (2008a). Expression of VP1 protein in the milk of
transgenic mice: a potential oral vaccine protects against enterovirus 71 infection. Vaccine
26, 2882-2889.
Chen, T.C., Lai, Y.K., Yu, C.K., and Juang, J.L. (2007). Enterovirus 71 triggering of
neuronal apoptosis through activation of Abl-Cdk5 signalling. Cell Microbiol 9,
2676-2688.
Chen, T.C., Liu, S.C., Huang, P.N., Chang, H.Y., Chern, J.H., and Shih, S.R. (2008b).
Antiviral activity of pyridyl imidazolidinones against enterovirus 71 variants. J Biomed
Sci.
Daenke, S., McCracken, S.A., and Booth, S. (1999). Human T-cell leukaemia/lymphoma
virus type 1 syncytium formation is regulated in a cell-specific manner by ICAM-1,
ICAM-3 and VCAM-1 and can be inhibited by antibodies to integrin beta2 or beta7. J
Gen Virol 80 ( Pt 6), 1429-1436.
De Simone, C., Cifone, M.G., Alesse, E., Steinberg, S.M., Di Marzio, L., Moretti, S.,
Famularo, G., Boschini, A., and Testi, R. (1996). Cell-associated ceramide in
HIV-1-infected subjects. AIDS 10, 675-676.
Dunehoo, A.L., Anderson, M., Majumdar, S., Kobayashi, N., Berkland, C., and Siahaan,
T.J. (2006). Cell adhesion molecules for targeted drug delivery. J Pharm Sci 95,
1856-1872.
Enomoto, A., Murakami, H., Asai, N., Morone, N., Watanabe, T., Kawai, K., Murakumo,
Y., Usukura, J., Kaibuchi, K., and Takahashi, M. (2005). Akt/PKB regulates actin
organization and cell motility via Girdin/APE. Dev Cell 9, 389-402.
Enomoto, A., Ping, J., and Takahashi, M. (2006). Girdin, a novel actin-binding protein,
and its family of proteins possess versatile functions in the Akt and Wnt signaling
pathways. Ann N Y Acad Sci 1086, 169-184.
Excoffon, K.J., Gansemer, N., Traver, G., and Zabner, J. (2007). Functional effects of
coxsackievirus and adenovirus receptor glycosylation on homophilic adhesion and
adenoviral infection. J Virol 81, 5573-5578.
Feige, U., and van Eden, W. (1996). Infection, autoimmunity and autoimmune disease.
EXS 77, 359-373.
Florea, N.R., Maglio, D., and Nicolau, D.P. (2003). Pleconaril, a novel antipicornaviral
agent. Pharmacotherapy 23, 339-348.
Foo, D.G., Alonso, S., Chow, V.T., and Poh, C.L. (2007a). Passive protection against
lethal enterovirus 71 infection in newborn mice by neutralizing antibodies elicited by a
synthetic peptide. Microbes Infect 9, 1299-1306.
Foo, D.G., Ang, R.X., Alonso, S., Chow, V.T., Quak, S.H., and Poh, C.L. (2007b).
Identification of immunodominant VP1 linear epitope of enterovirus 71 (EV71) using
synthetic peptides for detecting human anti-EV71 IgG antibodies in western blots. Clin
Microbiol Infect.
Guidotti, G. (1972). Membrane proteins. Annu Rev Biochem 41, 731-752.
Hagiwara, A., Tagaya, I., and Yoneyama, T. (1978). Epidemic of hand, foot and mouth
disease associated with enterovirus 71 infection. Intervirology 9, 60-63.
Hayward, J.C., Gillespie, S.M., Kaplan, K.M., Packer, R., Pallansch, M., Plotkin, S., and
Schonberger, L.B. (1989). Outbreak of poliomyelitis-like paralysis associated with
enterovirus 71. Pediatr Infect Dis J 8, 611-616.
Ho, M. (2000). Enterovirus 71: the virus, its infections and outbreaks. J Microbiol
Immunol Infect 33, 205-216.
Ho, M., Chen, E.R., Hsu, K.H., Twu, S.J., Chen, K.T., Tsai, S.F., Wang, J.R., and Shih,
S.R. (1999). An epidemic of enterovirus 71 infection in Taiwan. Taiwan Enterovirus
Epidemic Working Group. N Engl J Med 341, 929-935.
Huber, S.A. (1994). VCAM-1 is a receptor for encephalomyocarditis virus on murine
vascular endothelial cells. J Virol 68, 3453-3458.
Inoue, K., Arai, T., and Aoyagi, M. (1996). Real time observation of the binding of herpes
simplex virus type 1 (HSV-1) to immobilized heparan sulfate and the neutralization of
HSV-1 by sulfonated human immunoglobulin. J Biochem 120, 233-235.
Jindal, S., and Young, R.A. (1992). Vaccinia virus infection induces a stress response that
leads to association of Hsp70 with viral proteins. J Virol 66, 5357-5362.
Kanapin, A., Batalov, S., Davis, M.J., Gough, J., Grimmond, S., Kawaji, H., Magrane, M.,
Matsuda, H., Schonbach, C., Teasdale, R.D., et al. (2003). Mouse proteome analysis.
Genome Res 13, 1335-1344.
Kang, S.M., Kim, S.J., Kim, J.H., Lee, W., Kim, G.W., Lee, K.H., Choi, K.Y., and Oh,
J.W. (2009). Interaction of hepatitis C virus core protein with Hsp60 triggers the
production of reactive oxygen species and enhances TNF-alpha-mediated apoptosis.
Cancer Lett 279, 230-237.
Kim, Y.J., and Varki, A. (1997). Perspectives on the significance of altered glycosylation
of glycoproteins in cancer. Glycoconj J 14, 569-576.
Koraka, P., Murgue, B., Deparis, X., Van Gorp, E.C., Setiati, T.E., Osterhaus, A.D., and
Groen, J. (2004). Elevation of soluble VCAM-1 plasma levels in children with acute
dengue virus infection of varying severity. J Med Virol 72, 445-450.
Kuo, R.L., Kung, S.H., Hsu, Y.Y., and Liu, W.T. (2002). Infection with enterovirus 71 or
expression of its 2A protease induces apoptotic cell death. J Gen Virol 83, 1367-1376.
Lawen, A., Ly, J.D., Lane, D.J., Zarschler, K., Messina, A., and De Pinto, V. (2005).
Voltage-dependent anion-selective channel 1 (VDAC1)--a mitochondrial protein,
rediscovered as a novel enzyme in the plasma membrane. Int J Biochem Cell Biol 37,
277-282.
Leong, W.F., and Chow, V.T. (2006). Transcriptomic and proteomic analyses of
rhabdomyosarcoma cells reveal differential cellular gene expression in response to
enterovirus 71 infection. Cell Microbiol 8, 565-580.
Liang, C.C., Sun, M.J., Lei, H.Y., Chen, S.H., Yu, C.K., Liu, C.C., Wang, J.R., and Yeh,
T.M. (2004). Human endothelial cell activation and apoptosis induced by enterovirus 71
infection. J Med Virol 74, 597-603.
Lopez-Guerrero, J.A., Alonso, M., Martin-Belmonte, F., and Carrasco, L. (2000).
Poliovirus induces apoptosis in the human U937 promonocytic cell line. Virology 272,
250-256.
Matsuda, M., Tsukada, N., Miyagi, K., and Yanagisawa, N. (1995). Increased levels of
soluble vascular cell adhesion molecule-1 (VCAM-1) in the cerebrospinal fluid and sera
of patients with multiple sclerosis and human T lymphotropic virus type-1-associated
myelopathy. J Neuroimmunol 59, 35-40.
Melnick, J.L., Tagaya, I., and von Magnus, H. (1974). Enteroviruses 69, 70, and 71.
Intervirology 4, 369-370.
Ovchinnikov, Y.A. (1987). Structure of rhodopsin and bacteriorhodopsin. Photochem
Photobiol 45, 909-914.
Pelletier, I., Duncan, G., Pavio, N., and Colbere-Garapin, F. (1998). Molecular
mechanisms of poliovirus persistence: key role of capsid determinants during the
establishment phase. Cell Mol Life Sci 54, 1385-1402.
Pelletier, J., and Sonenberg, N. (1988). Internal initiation of translation of eukaryotic
mRNA directed by a sequence derived from poliovirus RNA. Nature 334, 320-325.
Percy, N., Belsham, G.J., Brangwyn, J.K., Sullivan, M., Stone, D.M., and Almond, J.W.
(1992). Intracellular modifications induced by poliovirus reduce the requirement for
structural motifs in the 5' noncoding region of the genome involved in internal initiation
of protein synthesis. J Virol 66, 1695-1701.
Pinsky, M.R., Vincent, J.L., Deviere, J., Alegre, M., Kahn, R.J., and Dupont, E. (1993).
Serum cytokine levels in human septic shock. Relation to multiple-system organ failure
and mortality. Chest 103, 565-575.
Ramsby, M.L., and Makowski, G.S. (1999). Differential detergent fractionation of
eukaryotic cells. Analysis by two-dimensional gel electrophoresis. Methods Mol Biol 112,
53-66.
Roberts, L.O., Seamons, R.A., and Belsham, G.J. (1998). Recognition of picornavirus
internal ribosome entry sites within cells; influence of cellular and viral proteins. RNA 4,
520-529.
Sachs, A.B., Sarnow, P., and Hentze, M.W. (1997). Starting at the beginning, middle, and
end: translation initiation in eukaryotes. Cell 89, 831-838.
Sato, H., Miyata, M., and Kasukawa, R. (1996). Expression of heat shock protein on
lymphocytes in peripheral blood and synovial fluid from patients with rheumatoid arthritis.
J Rheumatol 23, 2027-2032.
Sergina, N.V., and Moasser, M.M. (2007). The HER family and cancer: emerging
molecular mechanisms and therapeutic targets. Trends Mol Med 13, 527-534.
Shindarov, L.M., Chumakov, M.P., Voroshilova, M.K., Bojinov, S., Vasilenko, S.M.,
Iordanov, I., Kirov, I.D., Kamenov, E., Leshchinskaya, E.V., Mitov, G., et al. (1979).
Epidemiological, clinical, and pathomorphological characteristics of epidemic
poliomyelitis-like disease caused by enterovirus 71. J Hyg Epidemiol Microbiol Immunol
23, 284-295.
Smith, C.W. (2008). 3. Adhesion molecules and receptors. J Allergy Clin Immunol 121,S375-379; quiz S414.
Takata, S., Nakamura, H., Umemoto, S., Yamaguchil, K., Sekine, T., Kato, T., Nishioka,
K., and Matsuzaki, M. (2004). Identification of autoantibodies with the corresponding
antigen for repetitive coxsackievirus infection-induced cardiomyopathy. Circ J 68,
677-682.
Tan, S., Tan, H.T., and Chung, M.C. (2008). Membrane proteins and membrane
proteomics. Proteomics 8, 3924-3932.
Taylor-Papadimitriou, J., and Epenetos, A.A. (1994). Exploiting altered glycosylation
patterns in cancer: progress and challenges in diagnosis and therapy. Trends Biotechnol
12, 227-233.
Trono, D., Andino, R., and Baltimore, D. (1988). An RNA sequence of hundreds of
nucleotides at the 5' end of poliovirus RNA is involved in allowing viral protein synthesis.
J Virol 62, 2291-2299.
Tung, W.H., Sun, C.C., Hsieh, H.L., Wang, S.W., Horng, J.T., and Yang, C.M. (2007).
EV71 induces VCAM-1 expression via PDGF receptor, PI3-K/Akt, p38 MAPK, JNK and
NF-kappaB in vascular smooth muscle cells. Cell Signal 19, 2127-2137.
Varki, A. (1993). Biological roles of oligosaccharides: all of the theories are correct.
Glycobiology 3, 97-130.
Webster, A.D. (2005). Pleconaril--an advance in the treatment of enteroviral infection in
immuno-compromised patients. J Clin Virol 32, 1-6.
Weller, M., Stevens, A., Sommer, N., Melms, A., Dichgans, J., and Wietholter, H. (1991).
Comparative analysis of cytokine patterns in immunological, infectious, and oncological
neurological disorders. J Neurol Sci 104, 215-221.
Wen, Y.Y., Chang, T.Y., Chen, S.T., Li, C., and Liu, H.S. (2003). Comparative study of
enterovirus 71 infection of human cell lines. J Med Virol 70, 109-118.
Yeo, W.M., and Chow, V.T. (2007). The VP1 structural protein of enterovirus 71
interacts with human ornithine decarboxylase and gene trap ankyrin repeat. Microb
Pathog 42, 129-137.
Yu, A.C., and Lau, L.T. (2000). Expression of interleukin-1 alpha, tumor necrosis factor
alpha and interleukin-6 genes in astrocytes under ischemic injury. Neurochem Int 36,
369-377.
Zanone, M.M., Favaro, E., Ferioli, E., Huang, G.C., Klein, N.J., Perin, P.C., Peakman, M.,
Conaldi, P.G., and Camussi, G. (2007). Human pancreatic islet endothelial cells express
coxsackievirus and adenovirus receptor and are activated by coxsackie B virus infection.
FASEB J 21, 3308-3317.
電子全文 Fulltext
本電子全文僅授權使用者為學術研究之目的,進行個人非營利性質之檢索、閱讀、列印。請遵守中華民國著作權法之相關規定,切勿任意重製、散佈、改作、轉貼、播送,以免觸法。
論文使用權限 Thesis access permission:校內一年後公開,校外永不公開 campus withheld
開放時間 Available:
校內 Campus: 已公開 available
校外 Off-campus:永不公開 not available

您的 IP(校外) 位址是 3.134.118.95
論文開放下載的時間是 校外不公開

Your IP address is 3.134.118.95
This thesis will be available to you on Indicate off-campus access is not available.

紙本論文 Printed copies
紙本論文的公開資訊在102學年度以後相對較為完整。如果需要查詢101學年度以前的紙本論文公開資訊,請聯繫圖資處紙本論文服務櫃台。如有不便之處敬請見諒。
開放時間 available 已公開 available

QR Code